BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032F09LP1|AL429607
(883 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1282 1742 0.0
>3x_Contig1282
Length = 5781
Score = 1742 bits (879), Expect = 0.0
Identities = 882/883 (99%)
Strand = Plus / Minus
Query: 1 gatctagaaatgaaaaaaagataattcaattcaggtaggcatgatgagtctgttgggata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4643 gatctagaaatgaaaaaaagataattcaattcaggtaggcatgatgagtctgttgggata 4584
Query: 61 gaaacccccagataagagcagatatttttaaaagactaacccagaaaaaattaacttgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4583 gaaacccccagataagagcagatatttttaaaagactaacccagaaaaaattaacttgtt 4524
Query: 121 tgatgcatgagaaaaacagcaaaaagtaaaacagacggctgagccaagacaaaggttttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4523 tgatgcatgagaaaaacagcaaaaagtaaaacagacggctgagccaagacaaaggttttt 4464
Query: 181 cttggtacaaagaacccttgttcctccttttttcatgactagaccagatcacagcacttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4463 cttggtacaaagaacccttgttcctccttttttcatgactagaccagatcacagcacttt 4404
Query: 241 cttatgccaaagccgagaaattgaagtttgaaacggaagctggcaattattgtcggttcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4403 cttatgccaaagccgagaaattgaagtttgaaacggaagctggcaattattgtcggttcc 4344
Query: 301 ggttgaaatcgtgagattgacggcgagtaatgacagctgatgaaaaggtgcggaactcta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4343 ggttgaaatcgtgagattgacggcgagtaatgacagctgatgaaaaggtgcggaactcta 4284
Query: 361 aatcgtcggcctggttgccgtatatggattttctttgcctaacttttttacgatttcaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4283 aatcgtcggcctggttgccgtatatggattttctttgcctaacttttttacgatttcaat 4224
Query: 421 tctattttgctttatgcagaaaaatccactcatgaggaaaaatcattactgaaaatactc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4223 tctattttgctttatgcagaaaaatccactcatgaggaaaaatcattactgaaaatactc 4164
Query: 481 aaaactccgcagtgcaatttttcaacagacagattcacgtacattttatttccagttccg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4163 aaaactccgcagtgcaatttttcaacagacagattcacgtacattttatttccagttccg 4104
Query: 541 cataatcttgccagtctgcttgcctggactttgcttcatattcgtgcaaataatgggcct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4103 cataatcttgccagtctgcttgcctggactttgcttcatattcgtgcaaataatgggcct 4044
Query: 601 ttaaaagcgaacgagtgcggttgtatttgttcgcgtgtcaccgtcgtactgtttctaatt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4043 ttaaaagcgaacgagtgcggttgtatttgttcgcgtgtcaccgtcgtactgtttctaatt 3984
Query: 661 tcacttttttcttttttttaagtctctgcattttggactaagacatatttcacagagata 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3983 tcacttttttcttttttttaagtctctgcattttggactaagacatatttcacagagata 3924
Query: 721 ttgtgttgcgattgttggaaagagagttctaaacctcatgcaatgtcgttagaagcggat 780
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 3923 ttgtgttgcgattgttggaaagagagtactaaacctcatgcaatgtcgttagaagcggat 3864
Query: 781 gttttcaaaagcgagaacagtctcggatccaagttggaaagaaaaagtaaacatccatcg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3863 gttttcaaaagcgagaacagtctcggatccaagttggaaagaaaaagtaaacatccatcg 3804
Query: 841 gtgtacctagaacgctaacaatttagtgagcattctctgaagt 883
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3803 gtgtacctagaacgctaacaatttagtgagcattctctgaagt 3761
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8093
Number of Sequences: 1807
Number of extensions: 8093
Number of successful extensions: 89
Number of sequences better than 1.0e-20: 1
length of query: 883
length of database: 10,358,551
effective HSP length: 16
effective length of query: 867
effective length of database: 10,329,639
effective search space: 8955797013
effective search space used: 8955797013
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)